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Site Navigation

  • Guide
  • API Reference
  • Changelog

Overview

  • LaminDB: Data management for traceable, multimodal AI
  • Tutorial

How to

  • Install & setup
  • Query, search & load data
    • Query & search registries
    • Query tables in storage
    • Query arrays in storage
  • Transform data
    • Track lineage & manage workflows
    • Launch workflows & pipelines
  • Organize datasets
    • Curate datasets
  • Manage changes
  • Manage records & ontologies
    • Manage biological ontologies
    • Access public ontologies
  • Transfer & sync across databases

Other topics

  • Architecture
    • Will data & metadata stay in sync?
    • Will data get duplicated upon re-running code?
  • FAQ
    • Pydantic, Pandera, and LaminDB
    • Can I disable tracking run inputs?
    • How do I validate & annotate arbitrary data structures?
    • Keep artifacts local in a cloud instance
    • Why should I not index datasets with gene symbols?
    • How does search work?
  • Storage
    • Track artifacts, in-memory objects & folders [S3 storage]
    • Add, replace, cache and delete artifacts
    • Test AnnDataAccessor
    • Prepare sync artifacts from a local instance to a cloud instance
    • Sync artifacts from a local instance to a cloud instance
    • Vitessce integration

Transform data .md¶

  • Track lineage & manage workflows
  • Launch workflows & pipelines

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Query arrays in storage

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